Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HHIPQ96QV1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HHIPQ96QV1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HHIPQ96QV1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HHIPQ96QV1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 KRT16P6-202ENST00000425692 1426 ntBASIC19.8■□□□□ 0.76
HHIPQ96QV1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 AC022616.7-201ENST00000525383 220 ntBASIC19.8■□□□□ 0.76
HHIPQ96QV1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HHIPQ96QV1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HHIPQ96QV1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 AC073314.1-201ENST00000568729 2216 ntBASIC19.79■□□□□ 0.76
HHIPQ96QV1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 BX664615.1-201ENST00000443558 458 ntBASIC19.79■□□□□ 0.76
HHIPQ96QV1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HHIPQ96QV1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.79■□□□□ 0.76
HHIPQ96QV1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.78■□□□□ 0.76
HHIPQ96QV1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.78■□□□□ 0.76
HHIPQ96QV1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 AC011298.2-201ENST00000617989 482 ntBASIC19.78■□□□□ 0.76
HHIPQ96QV1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.78■□□□□ 0.76
HHIPQ96QV1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HHIPQ96QV1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.77■□□□□ 0.76
HHIPQ96QV1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.77■□□□□ 0.76
HHIPQ96QV1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HHIPQ96QV1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HHIPQ96QV1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.77■□□□□ 0.76
HHIPQ96QV1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HHIPQ96QV1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HHIPQ96QV1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HHIPQ96QV1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HHIPQ96QV1 AC117947.1-201ENST00000427448 529 ntBASIC19.77■□□□□ 0.76
HHIPQ96QV1 UPK3BP1-201ENST00000428678 509 ntBASIC19.77■□□□□ 0.76
HHIPQ96QV1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.77■□□□□ 0.76
HHIPQ96QV1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms