Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 PRSS44-201ENST00000515154 1146 ntBASIC20.29■□□□□ 0.84
NECTIN4Q96NY8 CLEC4GP1-201ENST00000596555 870 ntBASIC20.29■□□□□ 0.84
NECTIN4Q96NY8 AL023973.1-201ENST00000624619 620 ntBASIC20.29■□□□□ 0.84
NECTIN4Q96NY8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.29■□□□□ 0.84
NECTIN4Q96NY8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NECTIN4Q96NY8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NECTIN4Q96NY8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 KRT8P8-201ENST00000434750 1448 ntBASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 AL136038.3-201ENST00000561909 1096 ntBASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN4Q96NY8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 TMEM179-206ENST00000616017 1645 ntBASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 VENTXP5-201ENST00000523979 775 ntBASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NECTIN4Q96NY8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NECTIN4Q96NY8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NECTIN4Q96NY8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 PLK5-205ENST00000642079 1969 ntBASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 LINC00565-201ENST00000562710 2331 ntBASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 AL160286.2-201ENST00000567150 934 ntBASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.26■□□□□ 0.83
NECTIN4Q96NY8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 FP700111.2-201ENST00000619190 1892 ntBASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.25■□□□□ 0.83
NECTIN4Q96NY8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms