Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 AC026471.5-201ENST00000615068 467 ntBASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 HLA-A-209ENST00000638375 975 ntBASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMARCD1Q96GM5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 AL355355.2-201ENST00000442321 338 ntBASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 NUDT16P1-203ENST00000513809 620 ntBASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.58■□□□□ 0.89
SMARCD1Q96GM5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCD1Q96GM5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCD1Q96GM5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCD1Q96GM5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
SMARCD1Q96GM5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.58■□□□□ 0.88
SMARCD1Q96GM5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.58■□□□□ 0.88
SMARCD1Q96GM5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCD1Q96GM5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 AP003071.4-201ENST00000562276 1284 ntBASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 AC026271.3-201ENST00000571884 352 ntBASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 AL031985.4-201ENST00000642138 673 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms