Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 POM121L13P-201ENST00000422362 380 ntBASIC20.11■□□□□ 0.81
IFT43Q96FT9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 RPPH1-201ENST00000516869 333 ntBASIC20.11■□□□□ 0.81
IFT43Q96FT9 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.11■□□□□ 0.81
IFT43Q96FT9 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.11■□□□□ 0.81
IFT43Q96FT9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
IFT43Q96FT9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 AC008550.1-201ENST00000511500 884 ntBASIC20.1■□□□□ 0.81
IFT43Q96FT9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.1■□□□□ 0.81
IFT43Q96FT9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IFT43Q96FT9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 AC069544.1-201ENST00000609399 999 ntBASIC20.09■□□□□ 0.81
IFT43Q96FT9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
IFT43Q96FT9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFT43Q96FT9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.08■□□□□ 0.81
IFT43Q96FT9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.08■□□□□ 0.81
IFT43Q96FT9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
IFT43Q96FT9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
IFT43Q96FT9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IFT43Q96FT9 AC018445.3-201ENST00000624177 1945 ntBASIC20.08■□□□□ 0.81
IFT43Q96FT9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.08■□□□□ 0.81
IFT43Q96FT9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFT43Q96FT9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.08■□□□□ 0.81
IFT43Q96FT9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.08■□□□□ 0.81
IFT43Q96FT9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFT43Q96FT9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.08■□□□□ 0.81
IFT43Q96FT9 MIR718-201ENST00000390190 70 ntBASIC20.08■□□□□ 0.81
IFT43Q96FT9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IFT43Q96FT9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IFT43Q96FT9 FAM197Y4-202ENST00000622692 608 ntBASIC20.08■□□□□ 0.81
IFT43Q96FT9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFT43Q96FT9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
IFT43Q96FT9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.08■□□□□ 0.8
IFT43Q96FT9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
IFT43Q96FT9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFT43Q96FT9 BX323043.1-201ENST00000641006 1765 ntBASIC20.08■□□□□ 0.8
IFT43Q96FT9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
IFT43Q96FT9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.07■□□□□ 0.8
IFT43Q96FT9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 PHGDH-210ENST00000641115 1638 ntBASIC20.07■□□□□ 0.8
IFT43Q96FT9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.07■□□□□ 0.8
IFT43Q96FT9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.07■□□□□ 0.8
IFT43Q96FT9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
IFT43Q96FT9 C1QBPP2-201ENST00000528754 825 ntBASIC20.07■□□□□ 0.8
IFT43Q96FT9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.07■□□□□ 0.8
IFT43Q96FT9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms