Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 AC005332.7-201ENST00000614046 2005 ntBASIC16.96■□□□□ 0.3
CPNE2Q96FN4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE2Q96FN4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 AC006015.1-201ENST00000429970 570 ntBASIC16.95■□□□□ 0.3
CPNE2Q96FN4 C2orf69P4-201ENST00000565394 541 ntBASIC16.95■□□□□ 0.3
CPNE2Q96FN4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CPNE2Q96FN4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE2Q96FN4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE2Q96FN4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms