Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX11Q96FC9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
DDX11Q96FC9 KRASP1-201ENST00000407852 552 ntBASIC23.19■■□□□ 1.3
DDX11Q96FC9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX11Q96FC9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.19■■□□□ 1.3
DDX11Q96FC9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX11Q96FC9 AC110285.5-201ENST00000611501 352 ntBASIC23.19■■□□□ 1.3
DDX11Q96FC9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX11Q96FC9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX11Q96FC9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 KRT16P6-202ENST00000425692 1426 ntBASIC23.18■■□□□ 1.3
DDX11Q96FC9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 RPS2P55-201ENST00000397318 883 ntBASIC23.18■■□□□ 1.3
DDX11Q96FC9 AC012618.2-201ENST00000428058 849 ntBASIC23.18■■□□□ 1.3
DDX11Q96FC9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.18■■□□□ 1.3
DDX11Q96FC9 AC107956.1-201ENST00000494359 873 ntBASIC23.18■■□□□ 1.3
DDX11Q96FC9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX11Q96FC9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX11Q96FC9 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.17■■□□□ 1.3
DDX11Q96FC9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
DDX11Q96FC9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.17■■□□□ 1.3
DDX11Q96FC9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.17■■□□□ 1.3
DDX11Q96FC9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX11Q96FC9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.17■■□□□ 1.3
DDX11Q96FC9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX11Q96FC9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.17■■□□□ 1.3
DDX11Q96FC9 AC233702.5-201ENST00000584107 538 ntBASIC23.17■■□□□ 1.3
DDX11Q96FC9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
DDX11Q96FC9 AC073912.3-201ENST00000624414 853 ntBASIC23.17■■□□□ 1.3
DDX11Q96FC9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX11Q96FC9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX11Q96FC9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.16■■□□□ 1.3
DDX11Q96FC9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.16■■□□□ 1.3
DDX11Q96FC9 HLA-G-202ENST00000376815 851 ntBASIC23.16■■□□□ 1.3
DDX11Q96FC9 HLA-G-203ENST00000376818 1127 ntBASIC23.16■■□□□ 1.3
DDX11Q96FC9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.16■■□□□ 1.3
DDX11Q96FC9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 AC116562.4-201ENST00000641316 2276 ntBASIC23.16■■□□□ 1.3
DDX11Q96FC9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX11Q96FC9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
DDX11Q96FC9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX11Q96FC9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.15■■□□□ 1.3
DDX11Q96FC9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX11Q96FC9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX11Q96FC9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX11Q96FC9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX11Q96FC9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX11Q96FC9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX11Q96FC9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.15■■□□□ 1.3
DDX11Q96FC9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.15■■□□□ 1.3
DDX11Q96FC9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
DDX11Q96FC9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX11Q96FC9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX11Q96FC9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX11Q96FC9 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.15■■□□□ 1.3
DDX11Q96FC9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX11Q96FC9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX11Q96FC9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX11Q96FC9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.14■■□□□ 1.3
DDX11Q96FC9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms