Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNRNP40Q96DI7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNRNP40Q96DI7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.63■□□□□ 0.41
SNRNP40Q96DI7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNRNP40Q96DI7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNRNP40Q96DI7 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.63■□□□□ 0.41
SNRNP40Q96DI7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNRNP40Q96DI7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 FAM86EP-206ENST00000510506 987 ntBASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNRNP40Q96DI7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 KRT18P48-201ENST00000434763 852 ntBASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 TSPY17P-201ENST00000450329 467 ntBASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 AL023803.3-201ENST00000615559 522 ntBASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 AL121956.5-201ENST00000625261 221 ntBASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 AL031432.5-201ENST00000641059 760 ntBASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNRNP40Q96DI7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNRNP40Q96DI7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 IER3-202ENST00000376377 1350 ntBASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 TPM4P1-201ENST00000436100 807 ntBASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 HOMER2P1-201ENST00000455653 964 ntBASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 Z85996.1-201ENST00000494644 937 ntBASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 AL353719.1-201ENST00000566847 864 ntBASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 AL512604.3-201ENST00000569583 964 ntBASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 AF106564.1-201ENST00000607058 2553 ntBASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNRNP40Q96DI7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms