Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.92■□□□□ 0.14
LSM10Q969L4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LSM10Q969L4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LSM10Q969L4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM10Q969L4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.92■□□□□ 0.14
LSM10Q969L4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.92■□□□□ 0.14
LSM10Q969L4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM10Q969L4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.92■□□□□ 0.14
LSM10Q969L4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
LSM10Q969L4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM10Q969L4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
LSM10Q969L4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM10Q969L4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM10Q969L4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM10Q969L4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LSM10Q969L4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LSM10Q969L4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM10Q969L4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LSM10Q969L4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.91■□□□□ 0.14
LSM10Q969L4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.91■□□□□ 0.14
LSM10Q969L4 AC023632.3-201ENST00000521633 145 ntBASIC15.91■□□□□ 0.14
LSM10Q969L4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.91■□□□□ 0.14
LSM10Q969L4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 AC069236.1-201ENST00000604339 616 ntBASIC15.91■□□□□ 0.14
LSM10Q969L4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM10Q969L4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LSM10Q969L4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM10Q969L4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM10Q969L4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.91■□□□□ 0.14
LSM10Q969L4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM10Q969L4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.9■□□□□ 0.14
LSM10Q969L4 AC008694.1-202ENST00000636953 945 ntBASIC15.9■□□□□ 0.14
LSM10Q969L4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LSM10Q969L4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 AL161938.1-201ENST00000569833 2180 ntBASIC15.9■□□□□ 0.14
LSM10Q969L4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
LSM10Q969L4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LSM10Q969L4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.9■□□□□ 0.14
LSM10Q969L4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LSM10Q969L4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM10Q969L4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.89■□□□□ 0.13
LSM10Q969L4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms