Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A3Q93084 AC026471.5-201ENST00000615068 467 ntBASIC20.58■□□□□ 0.89
ATP2A3Q93084 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP2A3Q93084 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.58■□□□□ 0.88
ATP2A3Q93084 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2A3Q93084 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2A3Q93084 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2A3Q93084 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A3Q93084 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2A3Q93084 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.57■□□□□ 0.88
ATP2A3Q93084 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2A3Q93084 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ATP2A3Q93084 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 AL355355.2-201ENST00000442321 338 ntBASIC20.56■□□□□ 0.88
ATP2A3Q93084 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 CD177P1-201ENST00000606252 935 ntBASIC20.56■□□□□ 0.88
ATP2A3Q93084 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A3Q93084 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP2A3Q93084 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A3Q93084 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A3Q93084 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A3Q93084 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A3Q93084 AC087499.1-201ENST00000418141 1075 ntBASIC20.55■□□□□ 0.88
ATP2A3Q93084 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 FAM210CP-201ENST00000445714 574 ntBASIC20.55■□□□□ 0.88
ATP2A3Q93084 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 AP003071.4-201ENST00000562276 1284 ntBASIC20.55■□□□□ 0.88
ATP2A3Q93084 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A3Q93084 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A3Q93084 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 PCDHAC2-203ENST00000615316 3011 ntBASIC20.55■□□□□ 0.88
ATP2A3Q93084 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A3Q93084 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP2A3Q93084 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP2A3Q93084 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A3Q93084 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP2A3Q93084 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A3Q93084 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
ATP2A3Q93084 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A3Q93084 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A3Q93084 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP2A3Q93084 TSPY15P-201ENST00000457163 923 ntBASIC20.54■□□□□ 0.88
ATP2A3Q93084 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP2A3Q93084 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP2A3Q93084 AC073195.1-201ENST00000607241 877 ntBASIC20.54■□□□□ 0.88
ATP2A3Q93084 AC133561.5-201ENST00000635547 218 ntBASIC20.54■□□□□ 0.88
ATP2A3Q93084 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 AL512408.1-201ENST00000569378 2000 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms