Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 AL390955.1-201ENST00000428694 934 ntBASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ATP6V0A1Q93050 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ATP6V0A1Q93050 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
ATP6V0A1Q93050 TCF3P1-201ENST00000423021 1937 ntBASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 AC005363.2-201ENST00000618631 242 ntBASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A1Q93050 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 FITM1-202ENST00000559294 800 ntBASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 AL031985.4-201ENST00000642138 673 ntBASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 LINC01568-207ENST00000641790 1380 ntBASIC21.87■■□□□ 1.09
ATP6V0A1Q93050 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 CYP2D8P-201ENST00000433633 1490 ntBASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 NAPSB-206ENST00000562112 1266 ntBASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A1Q93050 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ATP6V0A1Q93050 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A1Q93050 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.85■■□□□ 1.09
ATP6V0A1Q93050 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms