Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SEMA4DQ92854 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA4DQ92854 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
SEMA4DQ92854 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.03■□□□□ 0.96
SEMA4DQ92854 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 KRASP1-201ENST00000407852 552 ntBASIC21.03■□□□□ 0.96
SEMA4DQ92854 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.03■□□□□ 0.96
SEMA4DQ92854 AC124016.1-201ENST00000609552 612 ntBASIC21.03■□□□□ 0.96
SEMA4DQ92854 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.03■□□□□ 0.96
SEMA4DQ92854 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SEMA4DQ92854 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA4DQ92854 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
SEMA4DQ92854 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 FAM201B-201ENST00000458407 597 ntBASIC21.02■□□□□ 0.96
SEMA4DQ92854 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SEMA4DQ92854 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA4DQ92854 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SEMA4DQ92854 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.02■□□□□ 0.95
SEMA4DQ92854 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA4DQ92854 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA4DQ92854 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA4DQ92854 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA4DQ92854 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA4DQ92854 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 ITM2C-210ENST00000620962 501 ntBASIC21.01■□□□□ 0.95
SEMA4DQ92854 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 KRT8P8-201ENST00000434750 1448 ntBASIC21.01■□□□□ 0.95
SEMA4DQ92854 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA4DQ92854 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA4DQ92854 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SEMA4DQ92854 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SEMA4DQ92854 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21■□□□□ 0.95
SEMA4DQ92854 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21■□□□□ 0.95
SEMA4DQ92854 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21■□□□□ 0.95
SEMA4DQ92854 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms