Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HTR7P1-201ENST00000538670 1336 ntBASIC18.45■□□□□ 0.54
TM9SF4Q92544 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 FP700111.2-201ENST00000619190 1892 ntBASIC18.44■□□□□ 0.54
TM9SF4Q92544 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 AC087499.1-201ENST00000418141 1075 ntBASIC18.44■□□□□ 0.54
TM9SF4Q92544 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.44■□□□□ 0.54
TM9SF4Q92544 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF4Q92544 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.43■□□□□ 0.54
TM9SF4Q92544 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TM9SF4Q92544 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TM9SF4Q92544 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.43■□□□□ 0.54
TM9SF4Q92544 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 KRT18P21-201ENST00000515767 1272 ntBASIC18.43■□□□□ 0.54
TM9SF4Q92544 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.43■□□□□ 0.54
TM9SF4Q92544 AF186192.3-201ENST00000583427 947 ntBASIC18.43■□□□□ 0.54
TM9SF4Q92544 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TM9SF4Q92544 MIR2861-201ENST00000636310 90 ntBASIC18.43■□□□□ 0.54
TM9SF4Q92544 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
TM9SF4Q92544 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TM9SF4Q92544 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF4Q92544 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF4Q92544 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF4Q92544 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF4Q92544 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.42■□□□□ 0.54
TM9SF4Q92544 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 AL355075.4-201ENST00000554988 638 ntBASIC18.42■□□□□ 0.54
TM9SF4Q92544 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF4Q92544 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF4Q92544 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF4Q92544 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF4Q92544 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF4Q92544 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TM9SF4Q92544 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF4Q92544 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.41■□□□□ 0.54
TM9SF4Q92544 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 AP003071.4-201ENST00000562276 1284 ntBASIC18.41■□□□□ 0.54
TM9SF4Q92544 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF4Q92544 CD177P1-201ENST00000606252 935 ntBASIC18.41■□□□□ 0.54
TM9SF4Q92544 AC010331.1-201ENST00000611423 582 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms