Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 AC120498.9-201ENST00000339021 3867 ntBASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A1Q8WWI5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SLC44A1Q8WWI5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC44A1Q8WWI5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC44A1Q8WWI5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SLC44A1Q8WWI5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.58■□□□□ 0.72
SLC44A1Q8WWI5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SLC44A1Q8WWI5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC44A1Q8WWI5 AC006333.2-201ENST00000607957 2099 ntBASIC19.58■□□□□ 0.72
SLC44A1Q8WWI5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 AL512625.2-201ENST00000417533 625 ntBASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 AC007322.1-201ENST00000426983 750 ntBASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 AC093787.1-201ENST00000450396 207 ntBASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 TFP1-202ENST00000475455 1573 ntBASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC44A1Q8WWI5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A1Q8WWI5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms