Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 RPS2P4-201ENST00000476944 856 ntBASIC20.53■□□□□ 0.88
RNF139Q8WU17 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 AL135905.2-201ENST00000584934 1404 ntBASIC20.53■□□□□ 0.88
RNF139Q8WU17 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF139Q8WU17 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF139Q8WU17 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF139Q8WU17 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF139Q8WU17 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RNF139Q8WU17 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF139Q8WU17 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF139Q8WU17 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.52■□□□□ 0.88
RNF139Q8WU17 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF139Q8WU17 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF139Q8WU17 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF139Q8WU17 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF139Q8WU17 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RNF139Q8WU17 RARRES2P10-201ENST00000564312 460 ntBASIC20.52■□□□□ 0.88
RNF139Q8WU17 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF139Q8WU17 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF139Q8WU17 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF139Q8WU17 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RNF139Q8WU17 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF139Q8WU17 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF139Q8WU17 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 AC009237.14-201ENST00000609975 1594 ntBASIC20.51■□□□□ 0.87
RNF139Q8WU17 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 HTR7P1-201ENST00000538670 1336 ntBASIC20.51■□□□□ 0.87
RNF139Q8WU17 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF139Q8WU17 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF139Q8WU17 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF139Q8WU17 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
RNF139Q8WU17 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF139Q8WU17 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF139Q8WU17 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF139Q8WU17 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF139Q8WU17 TUBB8P6-201ENST00000436895 1288 ntBASIC20.5■□□□□ 0.87
RNF139Q8WU17 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF139Q8WU17 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF139Q8WU17 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF139Q8WU17 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms