Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 AL512408.1-201ENST00000569378 2000 ntBASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 NAPSB-206ENST00000562112 1266 ntBASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 AC131212.4-201ENST00000623606 975 ntBASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 CYP2D8P-201ENST00000433633 1490 ntBASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3RF2Q8TEC5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 AC011506.1-201ENST00000474329 610 ntBASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 LINC01568-207ENST00000641790 1380 ntBASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SH3RF2Q8TEC5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 AC112907.3-201ENST00000577781 2400 ntBASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 TMEM179-206ENST00000616017 1645 ntBASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 B3GAT3P1-201ENST00000471720 806 ntBASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3RF2Q8TEC5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 RN7SL850P-201ENST00000579959 291 ntBASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 AC005363.2-201ENST00000618631 242 ntBASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 AC010947.1-201ENST00000623454 693 ntBASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 HLA-A-209ENST00000638375 975 ntBASIC20.27■□□□□ 0.84
SH3RF2Q8TEC5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SH3RF2Q8TEC5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SH3RF2Q8TEC5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SH3RF2Q8TEC5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SH3RF2Q8TEC5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms