Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 PGM5P4-201ENST00000421970 445 ntBASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 AC106739.1-201ENST00000617035 715 ntBASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNIH3Q8TBE1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 IRS3P-201ENST00000223076 1006 ntBASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 CCDC92B-201ENST00000575506 885 ntBASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNIH3Q8TBE1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 RASA4CP-201ENST00000424092 1398 ntBASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNIH3Q8TBE1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 CDV3P1-201ENST00000471403 739 ntBASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 MIR6084-201ENST00000622012 110 ntBASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CNIH3Q8TBE1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms