Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 TREX1-205ENST00000625293 1783 ntBASIC21.31■■□□□ 1
LNX1Q8TBB1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LNX1Q8TBB1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.31■■□□□ 1
LNX1Q8TBB1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.31■■□□□ 1
LNX1Q8TBB1 NBPF21P-201ENST00000425093 1451 ntBASIC21.31■■□□□ 1
LNX1Q8TBB1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LNX1Q8TBB1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LNX1Q8TBB1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LNX1Q8TBB1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LNX1Q8TBB1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
LNX1Q8TBB1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.31■■□□□ 1
LNX1Q8TBB1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LNX1Q8TBB1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
LNX1Q8TBB1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.3■■□□□ 1
LNX1Q8TBB1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
LNX1Q8TBB1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.3■■□□□ 1
LNX1Q8TBB1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 TSPY15P-201ENST00000457163 923 ntBASIC21.3■■□□□ 1
LNX1Q8TBB1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.3■■□□□ 1
LNX1Q8TBB1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.3■■□□□ 1
LNX1Q8TBB1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.3■■□□□ 1
LNX1Q8TBB1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.3■■□□□ 1
LNX1Q8TBB1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.3■■□□□ 1
LNX1Q8TBB1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.3■■□□□ 1
LNX1Q8TBB1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 MIR4785-201ENST00000585005 73 ntBASIC21.3■■□□□ 1
LNX1Q8TBB1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
LNX1Q8TBB1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.3■■□□□ 1
LNX1Q8TBB1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
LNX1Q8TBB1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.3■■□□□ 1
LNX1Q8TBB1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LNX1Q8TBB1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.29■■□□□ 1
LNX1Q8TBB1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.29■■□□□ 1
LNX1Q8TBB1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.29■■□□□ 1
LNX1Q8TBB1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.29■■□□□ 1
LNX1Q8TBB1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LNX1Q8TBB1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LNX1Q8TBB1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.29■■□□□ 1
LNX1Q8TBB1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LNX1Q8TBB1 HLA-G-202ENST00000376815 851 ntBASIC21.29■■□□□ 1
LNX1Q8TBB1 HLA-G-203ENST00000376818 1127 ntBASIC21.29■■□□□ 1
LNX1Q8TBB1 KRT16P5-201ENST00000455284 522 ntBASIC21.29■■□□□ 1
LNX1Q8TBB1 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.29■■□□□ 1
LNX1Q8TBB1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.29■■□□□ 1
LNX1Q8TBB1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.29■■□□□ 1
LNX1Q8TBB1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.29■■□□□ 1
LNX1Q8TBB1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.29■■□□□ 1
LNX1Q8TBB1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.29■■□□□ 1
LNX1Q8TBB1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.29■■□□□ 1
LNX1Q8TBB1 AL031963.3-201ENST00000606441 850 ntBASIC21.29■■□□□ 1
LNX1Q8TBB1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.29■■□□□ 1
LNX1Q8TBB1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.29■■□□□ 1
LNX1Q8TBB1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LNX1Q8TBB1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LNX1Q8TBB1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.29■■□□□ 1
LNX1Q8TBB1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LNX1Q8TBB1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.28■■□□□ 1
LNX1Q8TBB1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.28■■□□□ 1
LNX1Q8TBB1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
LNX1Q8TBB1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LNX1Q8TBB1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LNX1Q8TBB1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LNX1Q8TBB1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.28■■□□□ 1
LNX1Q8TBB1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LNX1Q8TBB1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.28■■□□□ 1
LNX1Q8TBB1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LNX1Q8TBB1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LNX1Q8TBB1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.28■■□□□ 1
LNX1Q8TBB1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.28■■□□□ 1
LNX1Q8TBB1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.28■■□□□ 1
LNX1Q8TBB1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.28■■□□□ 1
LNX1Q8TBB1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
LNX1Q8TBB1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LNX1Q8TBB1 AL121906.2-201ENST00000621597 723 ntBASIC21.28■■□□□ 1
LNX1Q8TBB1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LNX1Q8TBB1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LNX1Q8TBB1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LNX1Q8TBB1 HTR7P1-201ENST00000538670 1336 ntBASIC21.28■■□□□ 1
LNX1Q8TBB1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LNX1Q8TBB1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.27■■□□□ 1
LNX1Q8TBB1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.27■■□□□ 1
LNX1Q8TBB1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.27■■□□□ 1
LNX1Q8TBB1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.27■■□□□ 1
LNX1Q8TBB1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.27■■□□□ 1
LNX1Q8TBB1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms