Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC2Q8TAQ2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.89■■□□□ 1.26
SMARCC2Q8TAQ2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SMARCC2Q8TAQ2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SMARCC2Q8TAQ2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 AL359736.2-201ENST00000621992 437 ntBASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC2Q8TAQ2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 RPPH1-201ENST00000516869 333 ntBASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 AC066615.1-201ENST00000640911 628 ntBASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC2Q8TAQ2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 AC124283.5-201ENST00000624661 1809 ntBASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 MTDHP1-201ENST00000605323 784 ntBASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 FAM197Y4-202ENST00000622692 608 ntBASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC2Q8TAQ2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 BX323043.1-201ENST00000641006 1765 ntBASIC22.86■■□□□ 1.25
SMARCC2Q8TAQ2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms