Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTL9Q8NET4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTL9Q8NET4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTL9Q8NET4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
RTL9Q8NET4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTL9Q8NET4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.11■■□□□ 1.45
RTL9Q8NET4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC24.11■■□□□ 1.45
RTL9Q8NET4 AL160286.2-201ENST00000567150 934 ntBASIC24.11■■□□□ 1.45
RTL9Q8NET4 SLC25A1P4-201ENST00000567977 778 ntBASIC24.11■■□□□ 1.45
RTL9Q8NET4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.11■■□□□ 1.45
RTL9Q8NET4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.11■■□□□ 1.45
RTL9Q8NET4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
RTL9Q8NET4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTL9Q8NET4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTL9Q8NET4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTL9Q8NET4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTL9Q8NET4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTL9Q8NET4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTL9Q8NET4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTL9Q8NET4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTL9Q8NET4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTL9Q8NET4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTL9Q8NET4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTL9Q8NET4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RTL9Q8NET4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.1■■□□□ 1.45
RTL9Q8NET4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
RTL9Q8NET4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTL9Q8NET4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTL9Q8NET4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTL9Q8NET4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTL9Q8NET4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.09■■□□□ 1.45
RTL9Q8NET4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTL9Q8NET4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTL9Q8NET4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
RTL9Q8NET4 WWOX-216ENST00000569818 525 ntBASIC24.09■■□□□ 1.45
RTL9Q8NET4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTL9Q8NET4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.09■■□□□ 1.45
RTL9Q8NET4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTL9Q8NET4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.09■■□□□ 1.45
RTL9Q8NET4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.08■■□□□ 1.45
RTL9Q8NET4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
RTL9Q8NET4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.08■■□□□ 1.45
RTL9Q8NET4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
RTL9Q8NET4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTL9Q8NET4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTL9Q8NET4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.08■■□□□ 1.45
RTL9Q8NET4 INGX-201ENST00000359239 846 ntBASIC24.08■■□□□ 1.45
RTL9Q8NET4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.08■■□□□ 1.45
RTL9Q8NET4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.08■■□□□ 1.45
RTL9Q8NET4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
RTL9Q8NET4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RTL9Q8NET4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
RTL9Q8NET4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RTL9Q8NET4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.07■■□□□ 1.44
RTL9Q8NET4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.07■■□□□ 1.44
RTL9Q8NET4 ECEL1P2-202ENST00000465689 757 ntBASIC24.07■■□□□ 1.44
RTL9Q8NET4 AC128688.1-201ENST00000487626 519 ntBASIC24.07■■□□□ 1.44
RTL9Q8NET4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.07■■□□□ 1.44
RTL9Q8NET4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.07■■□□□ 1.44
RTL9Q8NET4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RTL9Q8NET4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RTL9Q8NET4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.07■■□□□ 1.44
RTL9Q8NET4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTL9Q8NET4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 KRT8P41-201ENST00000533985 1514 ntBASIC24.06■■□□□ 1.44
RTL9Q8NET4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 SLC25A1P2-201ENST00000430693 912 ntBASIC24.06■■□□□ 1.44
RTL9Q8NET4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.06■■□□□ 1.44
RTL9Q8NET4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms