Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC89Q8N998 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC89Q8N998 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC89Q8N998 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC89Q8N998 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC89Q8N998 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC89Q8N998 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC89Q8N998 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC89Q8N998 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC89Q8N998 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC89Q8N998 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC89Q8N998 AC133552.2-202ENST00000575694 574 ntBASIC20.25■□□□□ 0.83
CCDC89Q8N998 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC89Q8N998 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC89Q8N998 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC89Q8N998 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC89Q8N998 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC89Q8N998 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC89Q8N998 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC89Q8N998 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC89Q8N998 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC89Q8N998 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC89Q8N998 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC89Q8N998 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 AC080038.1-201ENST00000611274 1154 ntBASIC20.23■□□□□ 0.83
CCDC89Q8N998 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC89Q8N998 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC89Q8N998 MKRN4P-201ENST00000444706 1521 ntBASIC20.22■□□□□ 0.83
CCDC89Q8N998 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 AC093503.3-201ENST00000624917 2352 ntBASIC20.22■□□□□ 0.83
CCDC89Q8N998 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms