Protein–RNA interactions for Protein: Q8N7C7

RNF148, RING finger protein 148, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF148Q8N7C7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 KRT16P6-202ENST00000425692 1426 ntBASIC18.7■□□□□ 0.58
RNF148Q8N7C7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 AP001271.2-201ENST00000624018 1556 ntBASIC18.7■□□□□ 0.58
RNF148Q8N7C7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 AC019069.1-201ENST00000610008 1333 ntBASIC18.7■□□□□ 0.58
RNF148Q8N7C7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF148Q8N7C7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 AC008406.3-201ENST00000620001 1374 ntBASIC18.69■□□□□ 0.58
RNF148Q8N7C7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 AC006333.2-201ENST00000607957 2099 ntBASIC18.69■□□□□ 0.58
RNF148Q8N7C7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 AC097381.1-201ENST00000429019 1296 ntBASIC18.69■□□□□ 0.58
RNF148Q8N7C7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF148Q8N7C7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF148Q8N7C7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 CYP21A1P-202ENST00000354927 1481 ntBASIC18.67■□□□□ 0.58
RNF148Q8N7C7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF148Q8N7C7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF148Q8N7C7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms