Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 AC018553.1-201ENST00000616682 1458 ntBASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC01561Q8N1V8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 OR10C1-204ENST00000622521 1039 ntBASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01561Q8N1V8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
LINC01561Q8N1V8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01561Q8N1V8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
LINC01561Q8N1V8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01561Q8N1V8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms