Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 AC092368.3-202ENST00000574180 1591 ntBASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00346Q8IVM7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 AC018445.3-201ENST00000624177 1945 ntBASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 AP000974.1-201ENST00000623909 2387 ntBASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 AC097658.1-201ENST00000475555 843 ntBASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 AL032819.2-201ENST00000624543 2162 ntBASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00346Q8IVM7 TFP1-202ENST00000475455 1573 ntBASIC17.27■□□□□ 0.35
LINC00346Q8IVM7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.27■□□□□ 0.35
LINC00346Q8IVM7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.27■□□□□ 0.35
LINC00346Q8IVM7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.27■□□□□ 0.35
LINC00346Q8IVM7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00346Q8IVM7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 AC073210.2-201ENST00000430369 194 ntBASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 AL109923.1-201ENST00000618799 583 ntBASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 MYC-209ENST00000641252 345 ntBASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00346Q8IVM7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 RPS2P52-201ENST00000469610 820 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms