Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 SLC47A1P1-202ENST00000449666 945 ntBASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 DUX4L19-201ENST00000557448 1267 ntBASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 AC136469.2-201ENST00000623944 1028 ntBASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.69■□□□□ 0.42
CROCCP3Q8IVE0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.68■□□□□ 0.42
CROCCP3Q8IVE0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 AC011298.3-201ENST00000615796 283 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms