Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 AL020996.1-203ENST00000536896 2307 ntBASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.64■□□□□ 0.74
LYSMD3Q7Z3D4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.64■□□□□ 0.74
LYSMD3Q7Z3D4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
LYSMD3Q7Z3D4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.64■□□□□ 0.74
LYSMD3Q7Z3D4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 AC133681.1-201ENST00000465482 601 ntBASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD3Q7Z3D4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD3Q7Z3D4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 AC110285.5-201ENST00000611501 352 ntBASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 FAM197Y4-202ENST00000622692 608 ntBASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LYSMD3Q7Z3D4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 KRT18P16-201ENST00000510337 1294 ntBASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 AC093827.2-201ENST00000512654 315 ntBASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD3Q7Z3D4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms