Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 AC007952.6-201ENST00000573168 2673 ntBASIC17.99■□□□□ 0.47
ZNF550Q7Z398 AC003957.1-201ENST00000625108 2673 ntBASIC17.99■□□□□ 0.47
ZNF550Q7Z398 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
ZNF550Q7Z398 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 RPS2P52-201ENST00000469610 820 ntBASIC17.98■□□□□ 0.47
ZNF550Q7Z398 UNC93B5-201ENST00000530315 699 ntBASIC17.98■□□□□ 0.47
ZNF550Q7Z398 PNMA6B-201ENST00000538162 1200 ntBASIC17.98■□□□□ 0.47
ZNF550Q7Z398 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZNF550Q7Z398 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF550Q7Z398 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AC093484.2-201ENST00000580996 2166 ntBASIC17.96■□□□□ 0.47
ZNF550Q7Z398 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AC128676.1-201ENST00000454392 318 ntBASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AC098590.1-201ENST00000468126 897 ntBASIC17.96■□□□□ 0.47
ZNF550Q7Z398 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.96■□□□□ 0.47
ZNF550Q7Z398 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AC093827.2-201ENST00000512654 315 ntBASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AP003097.1-201ENST00000530657 1135 ntBASIC17.96■□□□□ 0.47
ZNF550Q7Z398 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF550Q7Z398 AL121906.2-201ENST00000621597 723 ntBASIC17.96■□□□□ 0.47
ZNF550Q7Z398 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms