Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 AC099778.1-201ENST00000568593 1911 ntBASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 AC112907.3-201ENST00000577781 2400 ntBASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD3Q6PCD5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 MIR718-201ENST00000390190 70 ntBASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 RPS2P55-201ENST00000397318 883 ntBASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 KRT16P5-201ENST00000455284 522 ntBASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 AC107956.1-201ENST00000494359 873 ntBASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 AP006587.1-201ENST00000534129 1502 ntBASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.36■□□□□ 0.85
RFWD3Q6PCD5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RFWD3Q6PCD5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 RARRES2P10-201ENST00000564312 460 ntBASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 AC004264.1-201ENST00000608354 794 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms