Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 MKRN4P-201ENST00000444706 1521 ntBASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 AC099791.2-201ENST00000605725 427 ntBASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 MIR6821-201ENST00000617625 74 ntBASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 LINC00554-201ENST00000564841 3011 ntBASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 PCDH8P1-201ENST00000428983 2773 ntBASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.84□□□□□ -0.03
CDPF1Q6NVV7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.83□□□□□ -0.03
CDPF1Q6NVV7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDPF1Q6NVV7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDPF1Q6NVV7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CDPF1Q6NVV7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDPF1Q6NVV7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 AC136469.2-201ENST00000623944 1028 ntBASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 WIZP1-201ENST00000531444 2299 ntBASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDPF1Q6NVV7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 AC097381.1-201ENST00000429019 1296 ntBASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDPF1Q6NVV7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms