Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 AC092368.3-202ENST00000574180 1591 ntBASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 HLA-L-209ENST00000420110 1011 ntBASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 RPS2P52-201ENST00000469610 820 ntBASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 AC097658.1-201ENST00000475555 843 ntBASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
FAM53AQ6NSI3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 TFP1-202ENST00000475455 1573 ntBASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 AL032819.2-201ENST00000624543 2162 ntBASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 AL355802.2-201ENST00000402069 882 ntBASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 AL390719.1-204ENST00000412397 1219 ntBASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FAM53AQ6NSI3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 PNMA6B-201ENST00000538162 1200 ntBASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms