Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 AC105233.4-201ENST00000642045 216 ntBASIC18.41■□□□□ 0.54
LPCAT4Q643R3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 KRT16P2-201ENST00000414673 1423 ntBASIC18.4■□□□□ 0.54
LPCAT4Q643R3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT4Q643R3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 AC099398.1-201ENST00000567919 2776 ntBASIC18.39■□□□□ 0.53
LPCAT4Q643R3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT4Q643R3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 Z98044.1-201ENST00000632503 1764 ntBASIC18.38■□□□□ 0.53
LPCAT4Q643R3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 BX842568.3-201ENST00000418104 571 ntBASIC18.38■□□□□ 0.53
LPCAT4Q643R3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 IGHV3-19-201ENST00000521488 291 ntBASIC18.38■□□□□ 0.53
LPCAT4Q643R3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LPCAT4Q643R3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LPCAT4Q643R3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LPCAT4Q643R3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LPCAT4Q643R3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LPCAT4Q643R3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LPCAT4Q643R3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.37■□□□□ 0.53
LPCAT4Q643R3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.37■□□□□ 0.53
LPCAT4Q643R3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms