Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 AC009237.14-201ENST00000609975 1594 ntBASIC17.23■□□□□ 0.35
FREM1Q5H8C1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 TUBB8P6-201ENST00000436895 1288 ntBASIC17.22■□□□□ 0.35
FREM1Q5H8C1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 KRT18P16-201ENST00000510337 1294 ntBASIC17.22■□□□□ 0.35
FREM1Q5H8C1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 MIR4785-201ENST00000585005 73 ntBASIC17.22■□□□□ 0.35
FREM1Q5H8C1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 AL158211.5-201ENST00000623583 2518 ntBASIC17.22■□□□□ 0.35
FREM1Q5H8C1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 FAM197Y1-201ENST00000421178 764 ntBASIC17.22■□□□□ 0.35
FREM1Q5H8C1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 AC011506.1-201ENST00000474329 610 ntBASIC17.22■□□□□ 0.35
FREM1Q5H8C1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.22■□□□□ 0.35
FREM1Q5H8C1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.21■□□□□ 0.35
FREM1Q5H8C1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 TSPY15P-201ENST00000457163 923 ntBASIC17.21■□□□□ 0.34
FREM1Q5H8C1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 AL445675.2-201ENST00000620291 557 ntBASIC17.21■□□□□ 0.34
FREM1Q5H8C1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FREM1Q5H8C1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 AP002982.1-201ENST00000492365 877 ntBASIC17.2■□□□□ 0.34
FREM1Q5H8C1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 AL031985.4-201ENST00000642138 673 ntBASIC17.2■□□□□ 0.34
FREM1Q5H8C1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.2■□□□□ 0.34
FREM1Q5H8C1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms