Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SGO1Q5FBB7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 NCF1B-203ENST00000435988 1254 ntBASIC18.97■□□□□ 0.63
SGO1Q5FBB7 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.97■□□□□ 0.63
SGO1Q5FBB7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 TSPY6P-201ENST00000448518 926 ntBASIC18.97■□□□□ 0.63
SGO1Q5FBB7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.97■□□□□ 0.63
SGO1Q5FBB7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 GUSBP6-202ENST00000438529 1198 ntBASIC18.96■□□□□ 0.63
SGO1Q5FBB7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 AC092118.2-201ENST00000613495 667 ntBASIC18.96■□□□□ 0.63
SGO1Q5FBB7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGO1Q5FBB7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 AC091874.3-201ENST00000512672 1195 ntBASIC18.95■□□□□ 0.62
SGO1Q5FBB7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.95■□□□□ 0.62
SGO1Q5FBB7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGO1Q5FBB7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms