Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 KRT8P8-201ENST00000434750 1448 ntBASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO1Q2MKA7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 ZNF815P-204ENST00000434898 1737 ntBASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 MTDHP1-201ENST00000605323 784 ntBASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 AC087289.5-201ENST00000586076 3175 ntBASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO1Q2MKA7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 AC098818.2-201ENST00000564925 2320 ntBASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RSPO1Q2MKA7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO1Q2MKA7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO1Q2MKA7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO1Q2MKA7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO1Q2MKA7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO1Q2MKA7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO1Q2MKA7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms