Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.23■□□□□ 0.83
SCAPQ12770 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.23■□□□□ 0.83
SCAPQ12770 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.23■□□□□ 0.83
SCAPQ12770 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.23■□□□□ 0.83
SCAPQ12770 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.23■□□□□ 0.83
SCAPQ12770 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.23■□□□□ 0.83
SCAPQ12770 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCAPQ12770 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SCAPQ12770 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCAPQ12770 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCAPQ12770 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCAPQ12770 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SCAPQ12770 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCAPQ12770 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCAPQ12770 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCAPQ12770 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCAPQ12770 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 RPPH1-201ENST00000516869 333 ntBASIC20.22■□□□□ 0.83
SCAPQ12770 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.22■□□□□ 0.83
SCAPQ12770 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 Z99916.2-201ENST00000604037 246 ntBASIC20.22■□□□□ 0.83
SCAPQ12770 AC004264.1-201ENST00000608354 794 ntBASIC20.22■□□□□ 0.83
SCAPQ12770 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCAPQ12770 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCAPQ12770 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCAPQ12770 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.22■□□□□ 0.83
SCAPQ12770 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
SCAPQ12770 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SCAPQ12770 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SCAPQ12770 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.21■□□□□ 0.83
SCAPQ12770 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SCAPQ12770 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SCAPQ12770 AC110285.5-201ENST00000611501 352 ntBASIC20.21■□□□□ 0.83
SCAPQ12770 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SCAPQ12770 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SCAPQ12770 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAPQ12770 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SCAPQ12770 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.2■□□□□ 0.82
SCAPQ12770 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SCAPQ12770 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 KRT16P5-201ENST00000455284 522 ntBASIC20.2■□□□□ 0.82
SCAPQ12770 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.2■□□□□ 0.82
SCAPQ12770 C1QBPP2-201ENST00000528754 825 ntBASIC20.2■□□□□ 0.82
SCAPQ12770 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.2■□□□□ 0.82
SCAPQ12770 C1QL1P1-201ENST00000568105 661 ntBASIC20.2■□□□□ 0.82
SCAPQ12770 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.2■□□□□ 0.82
SCAPQ12770 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.2■□□□□ 0.82
SCAPQ12770 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAPQ12770 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.2■□□□□ 0.82
SCAPQ12770 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.2■□□□□ 0.82
SCAPQ12770 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.19■□□□□ 0.82
SCAPQ12770 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAPQ12770 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.19■□□□□ 0.82
SCAPQ12770 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAPQ12770 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.19■□□□□ 0.82
SCAPQ12770 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAPQ12770 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.19■□□□□ 0.82
SCAPQ12770 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCAPQ12770 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.19■□□□□ 0.82
SCAPQ12770 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.19■□□□□ 0.82
SCAPQ12770 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.19■□□□□ 0.82
SCAPQ12770 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.19■□□□□ 0.82
SCAPQ12770 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCAPQ12770 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.19■□□□□ 0.82
SCAPQ12770 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.19■□□□□ 0.82
SCAPQ12770 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.19■□□□□ 0.82
SCAPQ12770 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.19■□□□□ 0.82
SCAPQ12770 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAPQ12770 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCAPQ12770 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SCAPQ12770 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SCAPQ12770 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCAPQ12770 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCAPQ12770 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms