Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH1Q08174 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH1Q08174 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDH1Q08174 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH1Q08174 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH1Q08174 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PCDH1Q08174 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH1Q08174 Z82202.1-201ENST00000623446 1880 ntBASIC18.86■□□□□ 0.61
PCDH1Q08174 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.85■□□□□ 0.61
PCDH1Q08174 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDH1Q08174 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH1Q08174 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH1Q08174 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH1Q08174 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDH1Q08174 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH1Q08174 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PCDH1Q08174 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 AC008403.3-201ENST00000598924 454 ntBASIC18.85■□□□□ 0.61
PCDH1Q08174 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH1Q08174 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH1Q08174 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH1Q08174 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH1Q08174 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDH1Q08174 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDH1Q08174 AP006587.1-201ENST00000534129 1502 ntBASIC18.84■□□□□ 0.61
PCDH1Q08174 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH1Q08174 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 POM121L13P-201ENST00000422362 380 ntBASIC18.84■□□□□ 0.61
PCDH1Q08174 KRT18P16-201ENST00000510337 1294 ntBASIC18.84■□□□□ 0.61
PCDH1Q08174 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH1Q08174 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH1Q08174 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH1Q08174 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH1Q08174 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH1Q08174 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH1Q08174 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDH1Q08174 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH1Q08174 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDH1Q08174 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDH1Q08174 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
PCDH1Q08174 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDH1Q08174 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH1Q08174 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PCDH1Q08174 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH1Q08174 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PCDH1Q08174 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH1Q08174 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH1Q08174 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH1Q08174 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH1Q08174 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH1Q08174 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH1Q08174 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH1Q08174 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH1Q08174 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDH1Q08174 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH1Q08174 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH1Q08174 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH1Q08174 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms