Protein–RNA interactions for Protein: P78509

RELN, Reelin, humanhuman

Predictions only

Length 3,460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RELNP78509 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RELNP78509 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.38■□□□□ 0.37
RELNP78509 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RELNP78509 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RELNP78509 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.37■□□□□ 0.37
RELNP78509 AP000523.1-201ENST00000398242 1049 ntBASIC17.37■□□□□ 0.37
RELNP78509 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RELNP78509 AL353719.1-201ENST00000566847 864 ntBASIC17.37■□□□□ 0.37
RELNP78509 MIR3652-201ENST00000579335 131 ntBASIC17.37■□□□□ 0.37
RELNP78509 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RELNP78509 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.37■□□□□ 0.37
RELNP78509 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.37■□□□□ 0.37
RELNP78509 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.37■□□□□ 0.37
RELNP78509 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.37■□□□□ 0.37
RELNP78509 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.37■□□□□ 0.37
RELNP78509 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
RELNP78509 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RELNP78509 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RELNP78509 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.37■□□□□ 0.37
RELNP78509 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.37■□□□□ 0.37
RELNP78509 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RELNP78509 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.36■□□□□ 0.37
RELNP78509 PRELID1P1-202ENST00000567272 903 ntBASIC17.36■□□□□ 0.37
RELNP78509 AC011298.2-201ENST00000617989 482 ntBASIC17.36■□□□□ 0.37
RELNP78509 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RELNP78509 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.36■□□□□ 0.37
RELNP78509 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 HMGN1P19-201ENST00000436976 333 ntBASIC17.36■□□□□ 0.37
RELNP78509 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.36■□□□□ 0.37
RELNP78509 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RELNP78509 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RELNP78509 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RELNP78509 AC004951.3-201ENST00000418645 1148 ntBASIC17.35■□□□□ 0.37
RELNP78509 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.35■□□□□ 0.37
RELNP78509 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RELNP78509 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.35■□□□□ 0.37
RELNP78509 SLC25A6P4-201ENST00000586535 553 ntBASIC17.35■□□□□ 0.37
RELNP78509 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RELNP78509 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RELNP78509 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RELNP78509 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RELNP78509 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RELNP78509 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.35■□□□□ 0.37
RELNP78509 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.35■□□□□ 0.37
RELNP78509 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.35■□□□□ 0.37
RELNP78509 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RELNP78509 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RELNP78509 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.34■□□□□ 0.37
RELNP78509 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RELNP78509 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 AC018553.1-201ENST00000616682 1458 ntBASIC17.34■□□□□ 0.37
RELNP78509 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RELNP78509 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RELNP78509 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RELNP78509 AC112907.2-201ENST00000448639 330 ntBASIC17.34■□□□□ 0.37
RELNP78509 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.34■□□□□ 0.37
RELNP78509 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.34■□□□□ 0.37
RELNP78509 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.34■□□□□ 0.37
RELNP78509 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.34■□□□□ 0.37
RELNP78509 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.34■□□□□ 0.37
RELNP78509 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
RELNP78509 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.34■□□□□ 0.37
RELNP78509 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RELNP78509 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.33■□□□□ 0.37
RELNP78509 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RELNP78509 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RELNP78509 AC092183.1-201ENST00000469884 875 ntBASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms