Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.29■■□□□ 1.16
CCNA1P78396 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
CCNA1P78396 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNA1P78396 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.29■■□□□ 1.16
CCNA1P78396 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCNA1P78396 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCNA1P78396 BX119927.1-201ENST00000636596 1552 ntBASIC22.29■■□□□ 1.16
CCNA1P78396 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.29■■□□□ 1.16
CCNA1P78396 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCNA1P78396 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNA1P78396 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNA1P78396 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNA1P78396 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CCNA1P78396 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CCNA1P78396 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.28■■□□□ 1.16
CCNA1P78396 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.28■■□□□ 1.16
CCNA1P78396 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.28■■□□□ 1.16
CCNA1P78396 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.28■■□□□ 1.16
CCNA1P78396 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.28■■□□□ 1.16
CCNA1P78396 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.28■■□□□ 1.16
CCNA1P78396 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.28■■□□□ 1.16
CCNA1P78396 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CCNA1P78396 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.28■■□□□ 1.16
CCNA1P78396 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.28■■□□□ 1.16
CCNA1P78396 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNA1P78396 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.28■■□□□ 1.16
CCNA1P78396 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.28■■□□□ 1.16
CCNA1P78396 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNA1P78396 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CCNA1P78396 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNA1P78396 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNA1P78396 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNA1P78396 HOMER2P1-201ENST00000455653 964 ntBASIC22.27■■□□□ 1.16
CCNA1P78396 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNA1P78396 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNA1P78396 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.27■■□□□ 1.16
CCNA1P78396 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNA1P78396 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 AP000550.4-202ENST00000639755 178 ntBASIC22.27■■□□□ 1.16
CCNA1P78396 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CCNA1P78396 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNA1P78396 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CCNA1P78396 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNA1P78396 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCNA1P78396 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.27■■□□□ 1.15
CCNA1P78396 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNA1P78396 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CCNA1P78396 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.26■■□□□ 1.15
CCNA1P78396 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.26■■□□□ 1.15
CCNA1P78396 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNA1P78396 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
CCNA1P78396 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CCNA1P78396 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNA1P78396 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNA1P78396 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNA1P78396 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNA1P78396 AC011558.1-201ENST00000623459 338 ntBASIC22.26■■□□□ 1.15
CCNA1P78396 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNA1P78396 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
CCNA1P78396 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNA1P78396 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.26■■□□□ 1.15
CCNA1P78396 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNA1P78396 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNA1P78396 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNA1P78396 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNA1P78396 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNA1P78396 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.25■■□□□ 1.15
CCNA1P78396 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.25■■□□□ 1.15
CCNA1P78396 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.25■■□□□ 1.15
CCNA1P78396 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCNA1P78396 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CCNA1P78396 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNA1P78396 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNA1P78396 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNA1P78396 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNA1P78396 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms