Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 AC008403.3-201ENST00000598924 454 ntBASIC17.09■□□□□ 0.33
HIST1H3AP68431 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 AP006587.1-201ENST00000534129 1502 ntBASIC17.09■□□□□ 0.33
HIST1H3AP68431 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HIST1H3AP68431 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.08■□□□□ 0.33
HIST1H3AP68431 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.08■□□□□ 0.33
HIST1H3AP68431 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HIST1H3AP68431 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HIST1H3AP68431 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.08■□□□□ 0.33
HIST1H3AP68431 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HIST1H3AP68431 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
HIST1H3AP68431 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H3AP68431 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H3AP68431 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H3AP68431 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.08■□□□□ 0.32
HIST1H3AP68431 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.08■□□□□ 0.32
HIST1H3AP68431 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.08■□□□□ 0.32
HIST1H3AP68431 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H3AP68431 POM121L13P-201ENST00000422362 380 ntBASIC17.08■□□□□ 0.32
HIST1H3AP68431 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.08■□□□□ 0.32
HIST1H3AP68431 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.08■□□□□ 0.32
HIST1H3AP68431 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H3AP68431 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HIST1H3AP68431 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.08■□□□□ 0.32
HIST1H3AP68431 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H3AP68431 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H3AP68431 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H3AP68431 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HIST1H3AP68431 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.06■□□□□ 0.32
HIST1H3AP68431 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST1H3AP68431 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST1H3AP68431 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H3AP68431 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H3AP68431 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H3AP68431 KRT18P16-201ENST00000510337 1294 ntBASIC17.06■□□□□ 0.32
HIST1H3AP68431 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.06■□□□□ 0.32
HIST1H3AP68431 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.06■□□□□ 0.32
HIST1H3AP68431 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H3AP68431 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST1H3AP68431 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HIST1H3AP68431 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H3AP68431 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H3AP68431 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H3AP68431 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms