Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 LINC01465-201ENST00000408887 1940 ntBASIC20.65■□□□□ 0.9
ERVFC1P60507 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERVFC1P60507 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.64■□□□□ 0.9
ERVFC1P60507 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ERVFC1P60507 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.64■□□□□ 0.9
ERVFC1P60507 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERVFC1P60507 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERVFC1P60507 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.64■□□□□ 0.89
ERVFC1P60507 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.64■□□□□ 0.89
ERVFC1P60507 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERVFC1P60507 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ERVFC1P60507 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.64■□□□□ 0.89
ERVFC1P60507 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERVFC1P60507 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.64■□□□□ 0.89
ERVFC1P60507 KRT126P-201ENST00000549467 1181 ntBASIC20.64■□□□□ 0.89
ERVFC1P60507 AL441883.1-201ENST00000566170 1045 ntBASIC20.64■□□□□ 0.89
ERVFC1P60507 AL160286.2-201ENST00000567150 934 ntBASIC20.64■□□□□ 0.89
ERVFC1P60507 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.64■□□□□ 0.89
ERVFC1P60507 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
ERVFC1P60507 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERVFC1P60507 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERVFC1P60507 AC079834.2-201ENST00000609776 1949 ntBASIC20.64■□□□□ 0.89
ERVFC1P60507 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERVFC1P60507 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ERVFC1P60507 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ERVFC1P60507 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.63■□□□□ 0.89
ERVFC1P60507 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.63■□□□□ 0.89
ERVFC1P60507 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.63■□□□□ 0.89
ERVFC1P60507 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.63■□□□□ 0.89
ERVFC1P60507 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.63■□□□□ 0.89
ERVFC1P60507 AL023973.1-201ENST00000624619 620 ntBASIC20.63■□□□□ 0.89
ERVFC1P60507 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.63■□□□□ 0.89
ERVFC1P60507 AL031432.5-201ENST00000641059 760 ntBASIC20.63■□□□□ 0.89
ERVFC1P60507 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.63■□□□□ 0.89
ERVFC1P60507 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.63■□□□□ 0.89
ERVFC1P60507 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERVFC1P60507 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERVFC1P60507 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERVFC1P60507 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERVFC1P60507 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ERVFC1P60507 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERVFC1P60507 AL359075.1-203ENST00000462729 1002 ntBASIC20.62■□□□□ 0.89
ERVFC1P60507 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.62■□□□□ 0.89
ERVFC1P60507 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.62■□□□□ 0.89
ERVFC1P60507 AC140113.3-201ENST00000605663 199 ntBASIC20.62■□□□□ 0.89
ERVFC1P60507 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.62■□□□□ 0.89
ERVFC1P60507 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERVFC1P60507 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERVFC1P60507 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERVFC1P60507 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERVFC1P60507 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERVFC1P60507 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.61■□□□□ 0.89
ERVFC1P60507 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERVFC1P60507 IER3-202ENST00000376377 1350 ntBASIC20.61■□□□□ 0.89
ERVFC1P60507 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERVFC1P60507 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ERVFC1P60507 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERVFC1P60507 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.61■□□□□ 0.89
ERVFC1P60507 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERVFC1P60507 HOMER2P1-201ENST00000455653 964 ntBASIC20.61■□□□□ 0.89
ERVFC1P60507 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.61■□□□□ 0.89
ERVFC1P60507 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.61■□□□□ 0.89
ERVFC1P60507 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.61■□□□□ 0.89
ERVFC1P60507 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ERVFC1P60507 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERVFC1P60507 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ERVFC1P60507 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ERVFC1P60507 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.6■□□□□ 0.89
ERVFC1P60507 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERVFC1P60507 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERVFC1P60507 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ERVFC1P60507 BX119927.1-201ENST00000636596 1552 ntBASIC20.6■□□□□ 0.89
ERVFC1P60507 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
ERVFC1P60507 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERVFC1P60507 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERVFC1P60507 KRT18P48-201ENST00000434763 852 ntBASIC20.6■□□□□ 0.89
ERVFC1P60507 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERVFC1P60507 AL671277.2-201ENST00000458060 996 ntBASIC20.6■□□□□ 0.89
ERVFC1P60507 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.6■□□□□ 0.89
ERVFC1P60507 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.6■□□□□ 0.89
ERVFC1P60507 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERVFC1P60507 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.6■□□□□ 0.89
ERVFC1P60507 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
ERVFC1P60507 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.6■□□□□ 0.89
ERVFC1P60507 AL512604.3-201ENST00000569583 964 ntBASIC20.6■□□□□ 0.89
ERVFC1P60507 AC093458.2-201ENST00000623150 629 ntBASIC20.6■□□□□ 0.89
ERVFC1P60507 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.6■□□□□ 0.89
ERVFC1P60507 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.6■□□□□ 0.89
ERVFC1P60507 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERVFC1P60507 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.59■□□□□ 0.89
ERVFC1P60507 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms