Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CLDN17P56750 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN17P56750 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN17P56750 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN17P56750 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN17P56750 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN17P56750 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CLDN17P56750 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN17P56750 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN17P56750 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 TSPY20P-201ENST00000450910 630 ntBASIC17.45■□□□□ 0.38
CLDN17P56750 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN17P56750 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDN17P56750 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN17P56750 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN17P56750 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN17P56750 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN17P56750 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN17P56750 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLDN17P56750 TREX1-205ENST00000625293 1783 ntBASIC17.44■□□□□ 0.38
CLDN17P56750 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.44■□□□□ 0.38
CLDN17P56750 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN17P56750 MTDHP1-201ENST00000605323 784 ntBASIC17.44■□□□□ 0.38
CLDN17P56750 AC073648.6-201ENST00000641589 218 ntBASIC17.44■□□□□ 0.38
CLDN17P56750 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN17P56750 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN17P56750 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.44■□□□□ 0.38
CLDN17P56750 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN17P56750 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLDN17P56750 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN17P56750 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN17P56750 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN17P56750 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN17P56750 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLDN17P56750 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN17P56750 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN17P56750 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN17P56750 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLDN17P56750 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN17P56750 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN17P56750 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN17P56750 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CLDN17P56750 YBX1P10-201ENST00000444752 975 ntBASIC17.43■□□□□ 0.38
CLDN17P56750 AC128676.1-201ENST00000454392 318 ntBASIC17.43■□□□□ 0.38
CLDN17P56750 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN17P56750 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN17P56750 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN17P56750 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN17P56750 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN17P56750 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN17P56750 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN17P56750 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN17P56750 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN17P56750 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.42■□□□□ 0.38
CLDN17P56750 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 AL023875.1-201ENST00000640777 796 ntBASIC17.42■□□□□ 0.38
CLDN17P56750 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLDN17P56750 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLDN17P56750 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN17P56750 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms