Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
APOC4P55056 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC4P55056 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.34□□□□□ -0.11
APOC4P55056 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.34□□□□□ -0.11
APOC4P55056 AL445675.2-201ENST00000620291 557 ntBASIC14.34□□□□□ -0.11
APOC4P55056 REXO1L12P-201ENST00000622156 912 ntBASIC14.34□□□□□ -0.11
APOC4P55056 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOC4P55056 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOC4P55056 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC4P55056 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC4P55056 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC4P55056 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC4P55056 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC4P55056 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.34□□□□□ -0.11
APOC4P55056 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC4P55056 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC4P55056 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC4P55056 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC4P55056 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC4P55056 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC4P55056 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
APOC4P55056 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
APOC4P55056 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
APOC4P55056 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 UNC93B2-201ENST00000285383 730 ntBASIC14.33□□□□□ -0.12
APOC4P55056 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.33□□□□□ -0.12
APOC4P55056 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.33□□□□□ -0.12
APOC4P55056 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.33□□□□□ -0.12
APOC4P55056 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.33□□□□□ -0.12
APOC4P55056 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
APOC4P55056 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC4P55056 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
APOC4P55056 TMEM179-206ENST00000616017 1645 ntBASIC14.33□□□□□ -0.12
APOC4P55056 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC4P55056 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC4P55056 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC4P55056 FEM1AP1-201ENST00000431297 1995 ntBASIC14.33□□□□□ -0.12
APOC4P55056 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 KRT8P8-201ENST00000434750 1448 ntBASIC14.32□□□□□ -0.12
APOC4P55056 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.32□□□□□ -0.12
APOC4P55056 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC4P55056 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
APOC4P55056 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.32□□□□□ -0.12
APOC4P55056 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.32□□□□□ -0.12
APOC4P55056 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
APOC4P55056 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.32□□□□□ -0.12
APOC4P55056 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.32□□□□□ -0.12
APOC4P55056 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.32□□□□□ -0.12
APOC4P55056 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC4P55056 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
APOC4P55056 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.32□□□□□ -0.12
APOC4P55056 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
APOC4P55056 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
APOC4P55056 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
APOC4P55056 FSCN1P1-201ENST00000568912 1481 ntBASIC14.31□□□□□ -0.12
APOC4P55056 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
APOC4P55056 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
APOC4P55056 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
APOC4P55056 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
APOC4P55056 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC4P55056 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.31□□□□□ -0.12
APOC4P55056 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC4P55056 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.31□□□□□ -0.12
APOC4P55056 AL355075.4-201ENST00000554988 638 ntBASIC14.31□□□□□ -0.12
APOC4P55056 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.31□□□□□ -0.12
APOC4P55056 LINC01023-201ENST00000606054 436 ntBASIC14.31□□□□□ -0.12
APOC4P55056 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC4P55056 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC4P55056 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms