Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS2P54278 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS2P54278 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS2P54278 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.14■□□□□ 0.82
PMS2P54278 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PMS2P54278 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.14■□□□□ 0.82
PMS2P54278 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PMS2P54278 AC005082.1-201ENST00000413042 2259 ntBASIC20.14■□□□□ 0.81
PMS2P54278 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
PMS2P54278 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.14■□□□□ 0.81
PMS2P54278 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PMS2P54278 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS2P54278 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.14■□□□□ 0.81
PMS2P54278 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.14■□□□□ 0.81
PMS2P54278 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PMS2P54278 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.14■□□□□ 0.81
PMS2P54278 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.14■□□□□ 0.81
PMS2P54278 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.14■□□□□ 0.81
PMS2P54278 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PMS2P54278 AL031963.3-201ENST00000606441 850 ntBASIC20.14■□□□□ 0.81
PMS2P54278 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.14■□□□□ 0.81
PMS2P54278 AC007613.1-201ENST00000572811 2597 ntBASIC20.14■□□□□ 0.81
PMS2P54278 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
PMS2P54278 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PMS2P54278 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS2P54278 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PMS2P54278 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.14■□□□□ 0.81
PMS2P54278 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS2P54278 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS2P54278 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS2P54278 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS2P54278 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PMS2P54278 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PMS2P54278 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.13■□□□□ 0.81
PMS2P54278 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS2P54278 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.13■□□□□ 0.81
PMS2P54278 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.13■□□□□ 0.81
PMS2P54278 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS2P54278 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS2P54278 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PMS2P54278 LETM1P2-201ENST00000597330 2178 ntBASIC20.12■□□□□ 0.81
PMS2P54278 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.12■□□□□ 0.81
PMS2P54278 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PMS2P54278 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PMS2P54278 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.12■□□□□ 0.81
PMS2P54278 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PMS2P54278 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 KRT8P20-201ENST00000423953 1409 ntBASIC20.11■□□□□ 0.81
PMS2P54278 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PMS2P54278 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.11■□□□□ 0.81
PMS2P54278 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.11■□□□□ 0.81
PMS2P54278 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
PMS2P54278 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.11■□□□□ 0.81
PMS2P54278 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PMS2P54278 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PMS2P54278 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS2P54278 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PMS2P54278 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PMS2P54278 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PMS2P54278 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
PMS2P54278 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.1■□□□□ 0.81
PMS2P54278 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms