Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AC073314.1-201ENST00000568729 2216 ntBASIC21.33■■□□□ 1
CDR1P51861 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CDR1P51861 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CDR1P51861 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CDR1P51861 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDR1P51861 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.32■■□□□ 1
CDR1P51861 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDR1P51861 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDR1P51861 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.32■■□□□ 1
CDR1P51861 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.32■■□□□ 1
CDR1P51861 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 PTBP1P-201ENST00000554374 1601 ntBASIC21.32■■□□□ 1
CDR1P51861 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDR1P51861 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDR1P51861 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.32■■□□□ 1
CDR1P51861 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.32■■□□□ 1
CDR1P51861 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.31■■□□□ 1
CDR1P51861 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.31■■□□□ 1
CDR1P51861 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDR1P51861 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDR1P51861 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
CDR1P51861 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.31■■□□□ 1
CDR1P51861 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDR1P51861 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDR1P51861 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.31■■□□□ 1
CDR1P51861 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.31■■□□□ 1
CDR1P51861 AL596275.1-201ENST00000423464 877 ntBASIC21.31■■□□□ 1
CDR1P51861 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDR1P51861 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.31■■□□□ 1
CDR1P51861 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.31■■□□□ 1
CDR1P51861 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.31■■□□□ 1
CDR1P51861 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.31■■□□□ 1
CDR1P51861 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.31■■□□□ 1
CDR1P51861 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDR1P51861 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
CDR1P51861 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
CDR1P51861 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.3■■□□□ 1
CDR1P51861 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
CDR1P51861 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CDR1P51861 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.3■■□□□ 1
CDR1P51861 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.3■■□□□ 1
CDR1P51861 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.3■■□□□ 1
CDR1P51861 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.3■■□□□ 1
CDR1P51861 MTDHP1-201ENST00000605323 784 ntBASIC21.3■■□□□ 1
CDR1P51861 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDR1P51861 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.3■■□□□ 1
CDR1P51861 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.3■■□□□ 1
CDR1P51861 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
CDR1P51861 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.29■■□□□ 1
CDR1P51861 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDR1P51861 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CDR1P51861 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.29■■□□□ 1
CDR1P51861 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.29■■□□□ 1
CDR1P51861 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.29■■□□□ 1
CDR1P51861 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 RPS2P4-201ENST00000476944 856 ntBASIC21.29■■□□□ 1
CDR1P51861 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CDR1P51861 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.29■■□□□ 1
CDR1P51861 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.29■■□□□ 1
CDR1P51861 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDR1P51861 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms