Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HCFC1P51610 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1P51610 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC1P51610 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1P51610 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC1P51610 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1P51610 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
HCFC1P51610 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC1P51610 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
HCFC1P51610 AP000692.2-201ENST00000608391 879 ntBASIC17.08■□□□□ 0.32
HCFC1P51610 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC1P51610 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC1P51610 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HCFC1P51610 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HCFC1P51610 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC1P51610 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HCFC1P51610 DUSP5P1-201ENST00000441325 1139 ntBASIC17.07■□□□□ 0.32
HCFC1P51610 AC091390.4-202ENST00000476426 537 ntBASIC17.07■□□□□ 0.32
HCFC1P51610 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.07■□□□□ 0.32
HCFC1P51610 AC011298.2-201ENST00000617989 482 ntBASIC17.07■□□□□ 0.32
HCFC1P51610 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HCFC1P51610 AL138966.2-201ENST00000621997 464 ntBASIC17.07■□□□□ 0.32
HCFC1P51610 AC010653.2-201ENST00000623505 997 ntBASIC17.07■□□□□ 0.32
HCFC1P51610 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HCFC1P51610 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC1P51610 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC1P51610 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.07■□□□□ 0.32
HCFC1P51610 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1P51610 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1P51610 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.06■□□□□ 0.32
HCFC1P51610 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1P51610 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC1P51610 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1P51610 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.06■□□□□ 0.32
HCFC1P51610 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
HCFC1P51610 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC1P51610 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC1P51610 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1P51610 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1P51610 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.06■□□□□ 0.32
HCFC1P51610 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1P51610 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HCFC1P51610 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HCFC1P51610 HLA-A-209ENST00000638375 975 ntBASIC17.06■□□□□ 0.32
HCFC1P51610 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC1P51610 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1P51610 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1P51610 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC1P51610 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.05■□□□□ 0.32
HCFC1P51610 KRT8P8-201ENST00000434750 1448 ntBASIC17.05■□□□□ 0.32
HCFC1P51610 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HCFC1P51610 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
HCFC1P51610 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC1P51610 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC1P51610 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.05■□□□□ 0.32
HCFC1P51610 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.05■□□□□ 0.32
HCFC1P51610 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.05■□□□□ 0.32
HCFC1P51610 CCR12P-201ENST00000446203 998 ntBASIC17.05■□□□□ 0.32
HCFC1P51610 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HCFC1P51610 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC1P51610 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC1P51610 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC1P51610 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.05■□□□□ 0.32
HCFC1P51610 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.05■□□□□ 0.32
HCFC1P51610 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.05■□□□□ 0.32
HCFC1P51610 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCFC1P51610 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.04■□□□□ 0.32
HCFC1P51610 TSPY17P-201ENST00000450329 467 ntBASIC17.04■□□□□ 0.32
HCFC1P51610 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.04■□□□□ 0.32
HCFC1P51610 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.04■□□□□ 0.32
HCFC1P51610 AC091076.1-201ENST00000610741 619 ntBASIC17.04■□□□□ 0.32
HCFC1P51610 FAM87A-204ENST00000613235 858 ntBASIC17.04■□□□□ 0.32
HCFC1P51610 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.04■□□□□ 0.32
HCFC1P51610 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HCFC1P51610 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.04■□□□□ 0.32
HCFC1P51610 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.04■□□□□ 0.32
HCFC1P51610 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.04■□□□□ 0.32
HCFC1P51610 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCFC1P51610 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCFC1P51610 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
HCFC1P51610 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.04■□□□□ 0.32
HCFC1P51610 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
HCFC1P51610 AC005332.1-201ENST00000577698 1310 ntBASIC17.04■□□□□ 0.32
HCFC1P51610 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.04■□□□□ 0.32
HCFC1P51610 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.04■□□□□ 0.32
HCFC1P51610 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HCFC1P51610 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCFC1P51610 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HCFC1P51610 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HCFC1P51610 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms