Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF144AP50876 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.14■□□□□ 0.49
RNF144AP50876 AC073210.2-201ENST00000430369 194 ntBASIC18.14■□□□□ 0.49
RNF144AP50876 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF144AP50876 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF144AP50876 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.14■□□□□ 0.49
RNF144AP50876 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF144AP50876 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF144AP50876 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF144AP50876 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF144AP50876 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF144AP50876 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF144AP50876 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF144AP50876 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF144AP50876 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF144AP50876 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF144AP50876 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF144AP50876 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF144AP50876 AP001271.2-201ENST00000624018 1556 ntBASIC18.13■□□□□ 0.49
RNF144AP50876 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF144AP50876 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF144AP50876 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF144AP50876 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF144AP50876 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF144AP50876 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF144AP50876 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF144AP50876 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF144AP50876 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF144AP50876 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 AL020996.1-203ENST00000536896 2307 ntBASIC18.12■□□□□ 0.49
RNF144AP50876 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF144AP50876 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF144AP50876 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF144AP50876 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF144AP50876 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF144AP50876 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF144AP50876 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF144AP50876 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF144AP50876 AC116351.2-201ENST00000606540 1585 ntBASIC18.11■□□□□ 0.49
RNF144AP50876 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF144AP50876 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF144AP50876 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF144AP50876 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RNF144AP50876 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF144AP50876 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF144AP50876 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF144AP50876 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF144AP50876 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF144AP50876 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.1■□□□□ 0.49
RNF144AP50876 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF144AP50876 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF144AP50876 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF144AP50876 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms