Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.63■□□□□ 0.73
MDH1P40925 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.63■□□□□ 0.73
MDH1P40925 AC138907.5-202ENST00000569484 235 ntBASIC19.63■□□□□ 0.73
MDH1P40925 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.63■□□□□ 0.73
MDH1P40925 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MDH1P40925 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.63■□□□□ 0.73
MDH1P40925 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.63■□□□□ 0.73
MDH1P40925 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MDH1P40925 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MDH1P40925 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.62■□□□□ 0.73
MDH1P40925 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.62■□□□□ 0.73
MDH1P40925 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.62■□□□□ 0.73
MDH1P40925 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MDH1P40925 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MDH1P40925 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.62■□□□□ 0.73
MDH1P40925 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MDH1P40925 KRT16P6-202ENST00000425692 1426 ntBASIC19.62■□□□□ 0.73
MDH1P40925 KRT8P17-201ENST00000453110 1448 ntBASIC19.62■□□□□ 0.73
MDH1P40925 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.62■□□□□ 0.73
MDH1P40925 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.62■□□□□ 0.73
MDH1P40925 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MDH1P40925 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MDH1P40925 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
MDH1P40925 AC091799.1-201ENST00000422823 811 ntBASIC19.62■□□□□ 0.73
MDH1P40925 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.62■□□□□ 0.73
MDH1P40925 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MDH1P40925 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MDH1P40925 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MDH1P40925 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.61■□□□□ 0.73
MDH1P40925 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.61■□□□□ 0.73
MDH1P40925 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.61■□□□□ 0.73
MDH1P40925 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.61■□□□□ 0.73
MDH1P40925 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MDH1P40925 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MDH1P40925 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.6■□□□□ 0.73
MDH1P40925 AC139713.2-201ENST00000641328 2723 ntBASIC19.6■□□□□ 0.73
MDH1P40925 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
MDH1P40925 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.6■□□□□ 0.73
MDH1P40925 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.6■□□□□ 0.73
MDH1P40925 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.6■□□□□ 0.73
MDH1P40925 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 AL512353.2-201ENST00000448759 1962 ntBASIC19.6■□□□□ 0.73
MDH1P40925 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MDH1P40925 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
MDH1P40925 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.59■□□□□ 0.73
MDH1P40925 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
MDH1P40925 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.59■□□□□ 0.73
MDH1P40925 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.59■□□□□ 0.73
MDH1P40925 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MDH1P40925 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.59■□□□□ 0.73
MDH1P40925 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.59■□□□□ 0.73
MDH1P40925 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MDH1P40925 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.59■□□□□ 0.73
MDH1P40925 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
MDH1P40925 MKRN4P-201ENST00000444706 1521 ntBASIC19.59■□□□□ 0.73
MDH1P40925 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MDH1P40925 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms