Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.63■□□□□ 0.09
ATP6V0CP27449 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
ATP6V0CP27449 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ATP6V0CP27449 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
ATP6V0CP27449 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ATP6V0CP27449 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0CP27449 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0CP27449 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0CP27449 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0CP27449 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 AC138907.5-202ENST00000569484 235 ntBASIC15.62■□□□□ 0.09
ATP6V0CP27449 MIR4767-201ENST00000582827 78 ntBASIC15.62■□□□□ 0.09
ATP6V0CP27449 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6V0CP27449 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0CP27449 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.61■□□□□ 0.09
ATP6V0CP27449 RARRES2P1-201ENST00000474487 481 ntBASIC15.61■□□□□ 0.09
ATP6V0CP27449 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 MIR4466-201ENST00000606121 54 ntBASIC15.61■□□□□ 0.09
ATP6V0CP27449 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6V0CP27449 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0CP27449 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms