Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 AC020763.4-201ENST00000623414 4170 ntBASIC18.15■□□□□ 0.5
TNFRSF1BP20333 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF1BP20333 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF1BP20333 AC018553.1-201ENST00000616682 1458 ntBASIC18.14■□□□□ 0.5
TNFRSF1BP20333 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF1BP20333 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 AL049812.1-201ENST00000432563 2267 ntBASIC18.14■□□□□ 0.49
TNFRSF1BP20333 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 AC004911.1-201ENST00000416316 871 ntBASIC18.14■□□□□ 0.49
TNFRSF1BP20333 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 RARRES2P6-201ENST00000567333 442 ntBASIC18.14■□□□□ 0.49
TNFRSF1BP20333 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 OR10C1-204ENST00000622521 1039 ntBASIC18.14■□□□□ 0.49
TNFRSF1BP20333 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF1BP20333 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF1BP20333 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 AL162430.1-201ENST00000480705 870 ntBASIC18.12■□□□□ 0.49
TNFRSF1BP20333 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms