Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF4P18848 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF4P18848 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATF4P18848 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
ATF4P18848 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.31■□□□□ 0.2
ATF4P18848 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATF4P18848 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF4P18848 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 AC091305.1-201ENST00000479476 895 ntBASIC16.31■□□□□ 0.2
ATF4P18848 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATF4P18848 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ATF4P18848 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF4P18848 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATF4P18848 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF4P18848 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.31■□□□□ 0.2
ATF4P18848 PLK5-205ENST00000642079 1969 ntBASIC16.31■□□□□ 0.2
ATF4P18848 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ATF4P18848 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF4P18848 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.3■□□□□ 0.2
ATF4P18848 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
ATF4P18848 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.3■□□□□ 0.2
ATF4P18848 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.3■□□□□ 0.2
ATF4P18848 AC010525.1-201ENST00000585559 441 ntBASIC16.3■□□□□ 0.2
ATF4P18848 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATF4P18848 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.3■□□□□ 0.2
ATF4P18848 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 AL162377.1-201ENST00000618844 1793 ntBASIC16.3■□□□□ 0.2
ATF4P18848 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.3■□□□□ 0.2
ATF4P18848 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.3■□□□□ 0.2
ATF4P18848 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATF4P18848 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.3■□□□□ 0.2
ATF4P18848 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF4P18848 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.3■□□□□ 0.2
ATF4P18848 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
ATF4P18848 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.29■□□□□ 0.2
ATF4P18848 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 MST1L-201ENST00000442552 2185 ntBASIC16.29■□□□□ 0.2
ATF4P18848 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.29■□□□□ 0.2
ATF4P18848 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 MIR939-201ENST00000401314 82 ntBASIC16.29■□□□□ 0.2
ATF4P18848 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATF4P18848 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATF4P18848 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF4P18848 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.29■□□□□ 0.2
ATF4P18848 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF4P18848 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATF4P18848 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF4P18848 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATF4P18848 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms