Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VCLP18206 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VCLP18206 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.62■□□□□ 0.73
VCLP18206 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 AP000974.1-201ENST00000623909 2387 ntBASIC19.62■□□□□ 0.73
VCLP18206 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VCLP18206 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCLP18206 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
VCLP18206 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.61■□□□□ 0.73
VCLP18206 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.61■□□□□ 0.73
VCLP18206 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCLP18206 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.61■□□□□ 0.73
VCLP18206 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.61■□□□□ 0.73
VCLP18206 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.61■□□□□ 0.73
VCLP18206 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VCLP18206 AC069544.1-201ENST00000609399 999 ntBASIC19.61■□□□□ 0.73
VCLP18206 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VCLP18206 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.61■□□□□ 0.73
VCLP18206 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCLP18206 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCLP18206 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCLP18206 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
VCLP18206 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCLP18206 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.61■□□□□ 0.73
VCLP18206 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.61■□□□□ 0.73
VCLP18206 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.61■□□□□ 0.73
VCLP18206 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.61■□□□□ 0.73
VCLP18206 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VCLP18206 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
VCLP18206 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VCLP18206 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VCLP18206 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.6■□□□□ 0.73
VCLP18206 AC004408.2-201ENST00000623613 2777 ntBASIC19.6■□□□□ 0.73
VCLP18206 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.6■□□□□ 0.73
VCLP18206 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
VCLP18206 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.6■□□□□ 0.73
VCLP18206 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.6■□□□□ 0.73
VCLP18206 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.6■□□□□ 0.73
VCLP18206 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCLP18206 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VCLP18206 TNXA-203ENST00000507684 2038 ntBASIC19.59■□□□□ 0.73
VCLP18206 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.59■□□□□ 0.73
VCLP18206 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
VCLP18206 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.59■□□□□ 0.73
VCLP18206 RPS2P52-201ENST00000469610 820 ntBASIC19.59■□□□□ 0.73
VCLP18206 PRKY-204ENST00000533551 1019 ntBASIC19.59■□□□□ 0.73
VCLP18206 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.59■□□□□ 0.73
VCLP18206 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.59■□□□□ 0.73
VCLP18206 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.59■□□□□ 0.73
VCLP18206 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VCLP18206 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCLP18206 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.58■□□□□ 0.73
VCLP18206 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
VCLP18206 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCLP18206 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCLP18206 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.58■□□□□ 0.73
VCLP18206 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms